AGAT

AGAT: Another GTF/GFF Analysis Toolkit. Suite of tools to handle gene annotations in any GTF/GFF format.

https://agat.readthedocs.io/en/latest/

Available modules

The overview below shows which AGAT installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).

To start using AGAT, load one of these modules using a module load command like:

module load AGAT/1.5.0-GCC-12.3.0

(This data was automatically generated on Thu, 22 Jan 2026 at 12:03:27 EST)

	gateway	generic	zen2	zen3	zen4	skylake_avx512
	Gateway nodes	everywhere (except Grace nodes)	amd20	amd22	amd24	intel18,amd20-v100,amd21,intel21
AGAT/1.5.0-GCC-12.3.0	-	x	-	-	-	-
AGAT/1.4.0-GCC-12.3.0	-	x	-	-	-	-

AGAT/1.5.0-GCC-12.3.0

This is a list of extensions included in the module:

AGAT-1.5.0, Class::MethodMaker-2.24, File::Share-0.27, Set::Object-1.42, Sort::Naturally-1.03, Term::ProgressBar-2.23

AGAT/1.4.0-GCC-12.3.0

This is a list of extensions included in the module:

AGAT-1.4.0, Class::MethodMaker-2.24, File::Share-0.27, Set::Object-1.42, Sort::Naturally-1.03, Term::ProgressBar-2.23