BBMap
BBMap short read aligner, and other bioinformatic tools.
https://sourceforge.net/projects/bbmap/
Available modules
The overview below shows which BBMap installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using BBMap, load one of these modules using a module load command like:
module load BBMap/39.19-GCC-12.3.0
(This data was automatically generated on Thu, 03 Jul 2025 at 12:32:57 EDT)
| gateway | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Gateway nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| BBMap/39.19-GCC-12.3.0 | - | x | - | - | - | - | - |
| BBMap/39.01-GCC-12.3.0Java11 | - | x | - | - | - | - | - |
| BBMap/39.01-GCC-12.3.0 | - | x | - | - | - | - | - |
| BBMap/39.01-GCC-12.2.0 | - | x | - | - | - | x | - |