BCFtools
Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants
Available modules
The overview below shows which BCFtools installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using BCFtools, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 17 Apr 2025 at 12:00:12 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| BCFtools/1.19-GCC-13.2.0 | - | x | - | - | - | - | - |
| BCFtools/1.18-GCC-12.3.0 | - | x | - | - | - | x | - |
| BCFtools/1.17-GCC-12.2.0 | - | x | - | - | - | x | - |