BLAT
BLAT on DNA is designed to quickly find sequences of 95% andgreater similarity of length 25 bases or more.
https://genome.ucsc.edu/goldenPath/help/blatSpec.html
Available modules
The overview below shows which BLAT installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using BLAT, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 17 Apr 2025 at 12:00:12 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| BLAT/3.7-GCC-12.3.0 | - | x | - | - | - | - | - |