BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes. Users may wish to personally install compleasm and MakeHub for additional functionality.
https://github.com/Gaius-Augustus/BRAKER
Available modules
The overview below shows which BRAKER installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using BRAKER, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 05 Jun 2025 at 12:15:06 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| BRAKER/3.0.8-foss-2023a | - | x | - | - | - | - | - |
| BRAKER/3.0.8-2024-06-12-foss-2023a | - | x | - | - | - | - | - |