CD-HIT

CD-HIT is a very widely used program for clustering and comparing protein or nucleotide sequences.

https://github.com/weizhongli/cdhit/wiki

Available modules

The overview below shows which CD-HIT installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).

To start using CD-HIT, load one of these modules using a module load command like:

module load CD-HIT/4.8.1-GCC-12.3.0

(This data was automatically generated on Thu, 22 Jan 2026 at 12:03:27 EST)

	gateway	generic	zen2	zen3	zen4	skylake_avx512
	Gateway nodes	everywhere (except Grace nodes)	amd20	amd22	amd24	intel18,amd20-v100,amd21,intel21
CD-HIT/4.8.1-GCC-12.3.0	-	x	-	-	-	-
CD-HIT/4.8.1-GCC-12.2.0	-	x	-	-	-	-