Exonerate
Exonerate is a generic tool for pairwise sequence comparison. It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate
Available modules
The overview below shows which Exonerate installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using Exonerate, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 15 May 2025 at 12:00:14 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| Exonerate/2.4.0-GCC-12.3.0 | - | x | - | - | - | - | - |