LTR_retriever
LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
https://github.com/oushujun/LTR_retriever
Available modules
The overview below shows which LTR_retriever installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using LTR_retriever, load one of these modules using a module load command like:
module load LTR_retriever/2.9.8-foss-2023a
(This data was automatically generated on Thu, 22 Jan 2026 at 12:03:27 EST)
| gateway | generic | zen2 | zen3 | zen4 | skylake_avx512 | |
|---|---|---|---|---|---|---|
| Gateway nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel18,amd20-v100,amd21,intel21 | |
| LTR_retriever/2.9.8-foss-2023a | - | x | - | - | - | - |
| LTR_retriever/2.9.5-foss-2023a | - | x | - | - | - | - |