QUAST
QUAST evaluates genome assemblies by computing various metrics.It works both with and without reference genomes. The tool accepts multipleassemblies, thus is suitable for comparison.
https://github.com/ablab/quast
Available modules
The overview below shows which QUAST installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using QUAST, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 17 Apr 2025 at 12:00:12 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| QUAST/5.2.0-foss-2023a | - | x | - | - | - | - | - |
QUAST/5.2.0-foss-2023a
This is a list of extensions included in the module:
QUAST-5.2.0