SPAdes
Genome assembler for single-cell and isolates data sets
https://github.com/ablab/spades
Available modules
The overview below shows which SPAdes installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using SPAdes, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 05 Jun 2025 at 12:15:06 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| SPAdes/3.15.4-GCC-12.3.0 | - | x | - | - | - | - | - |