gffread
GFF/GTF parsing utility providing format conversions,region filtering, FASTA sequence extraction and more.
https://ccb.jhu.edu/software/stringtie/gff.shtml#gffread
Available modules
The overview below shows which gffread installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using gffread, load one of these modules using a module load command like:
module load gffread/0.12.7-GCCcore-12.3.0
(This data was automatically generated on Thu, 22 Jan 2026 at 12:03:27 EST)
| gateway | generic | zen2 | zen3 | zen4 | skylake_avx512 | |
|---|---|---|---|---|---|---|
| Gateway nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel18,amd20-v100,amd21,intel21 | |
| gffread/0.12.7-GCCcore-12.3.0 | - | x | - | - | - | - |