kallisto
kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads.
https://pachterlab.github.io/kallisto/
Available modules
The overview below shows which kallisto installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using kallisto, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 17 Apr 2025 at 12:00:12 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| kallisto/0.50.0-gompi-2023a | - | x | - | - | - | - | - |