ncbi-vdb
The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives.
https://github.com/ncbi/ncbi-vdb
Available modules
The overview below shows which ncbi-vdb installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using ncbi-vdb, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 15 May 2025 at 12:00:14 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| ncbi-vdb/3.0.10-gompi-2023a | - | x | - | - | - | x | - |