Bismark
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
https://www.bioinformatics.babraham.ac.uk/projects/bismark/
Available modules
The overview below shows which Bismark installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using Bismark, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 17 Apr 2025 at 12:00:12 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| Bismark/0.24.1-GCC-12.2.0 | - | x | - | - | - | - | - |