TrimGalore
Trim Galore is a wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data.
https://github.com/FelixKrueger/TrimGalore
Available modules
The overview below shows which TrimGalore installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using TrimGalore, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 15 May 2025 at 12:00:14 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| TrimGalore/0.6.10-GCCcore-12.2.0 | - | x | - | - | - | x | - |