Trinity
Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-Seq reads.
https://trinityrnaseq.github.io
Available modules
The overview below shows which Trinity installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).
To start using Trinity, load one of these modules using a module load command like:
1 | |
(This data was automatically generated on Thu, 29 May 2025 at 12:00:16 EDT)
| neoverse_v1 | generic | zen2 | zen3 | zen4 | haswell | skylake_avx512 | |
|---|---|---|---|---|---|---|---|
| Grace Nodes | everywhere (except Grace nodes) | amd20 | amd22 | amd24 | intel16 | intel18,amd20-v100,amd21,intel21 | |
| Trinity/2.15.1-foss-2023a | - | x | - | - | - | - | - |