deepTools

deepTools is a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq.

https://deeptools.readthedocs.io/

Available modules

The overview below shows which deepTools installations are available per target architecture in the HPCC module system, ordered based on software version (new to old).

To start using deepTools, load one of these modules using a module load command like:

module load deepTools/3.5.5-foss-2023a

(This data was automatically generated on Thu, 22 Jan 2026 at 12:03:27 EST)

	gateway	generic	zen2	zen3	zen4	skylake_avx512
	Gateway nodes	everywhere (except Grace nodes)	amd20	amd22	amd24	intel18,amd20-v100,amd21,intel21
deepTools/3.5.5-foss-2023a	-	x	-	-	-	-

deepTools/3.5.5-foss-2023a

This is a list of extensions included in the module:

deepTools-3.5.5, deeptoolsintervals-0.1.9, numpydoc-1.5.0, py2bit-0.3.0