HTSeq
HTSeq is a Python package for analysis of high-throughput sequencing
data. It's available upon a fresh login to a dev-node. For example, you
can call command htseq-count
directly without needing to load specific
modules. This is because HTSeq is installed to the default Python
distribution (you can run module list to see the list of modules loaded
by default).
If you happen to run a module purge command in the middle of your work, you need to load the default Python back again in order to use HTSeq. To do so:
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Tip: if you want to go back to the original shell environment immediately
after your login, you can run: exec bash -l